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★ Amy Star @ Celeste mod% ★ (@AmyZenunim@unstable.systems)

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sarcozona
24 minutes ago
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Separated Bike Lanes Means Safer Streets, Study Says — Streetsblog USA

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Cities that build protected lanes for cyclists end up with safer roads for people on bikes and people in cars and on foot, a new study of 12 large metropolises revealed Wednesday.

Researchers at the University of Colorado Denver and the University of New Mexico discovered cities with protected and separated bike lanes had 44 percent fewer deaths than the average city.

“Protected separated bike facilities was one of our biggest factors associated with lower fatalities and lower injuries for all road users,” study co-author Wesley Marshall, a University of Colorado Denver engineering professor, told Streetsblog. “If you’re going out of your way to make your city safe for a broader range of cyclists ... we’re finding that it ends up being a safer city for everyone.”

Marshall and his team of researchers analyzed 17,000 fatalities and 77,000 severe injuries in cities including Denver, Portland, Dallas, Seattle, San Francisco, Kansas City and Chicago between 2000 and 2012. All had experienced an increase in cycling as they built more infrastructure. (Update: All of those cities also have varying rates of gentrification, which needed to be factored into the results, specifically because of "the safety disparities associated with gentrification." Researchers said safety improvements in largely gentrified areas "suggest equity issues and the need for future research.")

Researchers assumed that having more cyclists on the street was spurring drivers to slow down — a relic of a 2017 study that found that cities with high cycling rates had fewer traffic crashes. But it turned out that wasn’t the case.

Instead, researchers found that bike infrastructure, particularly physical barriers that separate bikes from speeding cars as opposed to shared or painted lanes, significantly lowered fatalities in cities that installed them.

After analyzing traffic crash data over a 13-year period in areas with separated bike lanes on city streets, researches estimated that having a protected bike facility in a city would result in 44 percent fewer deaths and 50 percent fewer serous injuries than an average city.

In Portland, where the population of bike commuters increased from 1.2 to 7 percent between 1990 and 2015, fatality rates fell 75 percent in the same period. Fatal crash rates dropped 60.6 percent in Seattle, 49.3 percent in San Francisco, 40.3 percent in Denver, and 38.2 percent in Chicago over the same period as cities added more protected and separated lanes as part of their Vision Zero plans.

“Bike facilities end up slowing cars down, even when a driver hits another driver, it’s less likely to be a fatality because it’s happening at a slower speed,” Marshall said.

Perhaps even more important: Researchers found that painted bike lanes provided no improvement on road safety. And their review earlier this year of shared roadways — where bike symbols are painted in the middle of a lane — revealed that it was actually safer to have no bike markings at all.

“We found they’re worse than nothing. You’re better off doing nothing,” Marshall said. “It gives people a false sense of security that’s a bike lane. It’s just a sign telling cyclists it might just be there.”

Not all protected bike lanes provide the same level of security for cyclists and drivers. In Denver, for instance, some protected lanes have plastic bollards that are interspersed along the roadway, allowing cars and trucks to park in the bike path and forcing cyclists to swerve into the street.

“When you have them designed like that, even if it’s a protected lane, that might create a more dangerous situation because cyclists are merging in and out of the road versus places with foot-wide concrete planters,” Marshall added.

New York was not included in this longitudinal study because the high number of cyclists and lanes would have overwhelmed their models, but will be a focus of a future study, Marshall said. New York's Department of Transportation consistently touts how its protected bike lanes improve safety for all road users — but often denies neighborhoods the full protection of such infrastructure when some car owners complain of lost parking.

Sometimes, it's not always "safety first." 

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sarcozona
2 hours ago
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McNadoMD: "If bird flu starts transmittin…" - the Octodon

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sarcozona
21 hours ago
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Down-to-earth drought resistance

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Drought is a serious threat to global food security. In upstream research, crop drought-tolerant traits are often studied under extreme drought conditions, which can seem irrelevant in the eyes of breeders.

Although wildfire may have positive ecological function (as we discussed in our February editorial1), drought — its related, but seemingly lesser, stressor — is harmful or even devastating, particularly to agricultural ecosystems. Drought develops gradually and its start or end can be difficult to identify, but its effects are often long-term and catastrophic. Climate change is predicted to lead to more frequent and severe droughts in many parts of the world. Last year was one of the hottest and driest in historical record, and people in the Horn of Africa suffered particularly badly2; a record that is likely to be surpassed all too soon. Breeding drought-resilient crops is often proposed as a solution for mitigating the negative outcomes of drought and has become an important and urgent goal for global research communities. But this endeavour is impeded by the gap between basic research and breeding practice.

A Comment published in Nature3 in September 2023 highlighted that many previous publications have oversold the effects of their reported genes in yield gain. Out of 1,671 reported yield-increasing genes, only one showed constant yield benefits in maize across years and locations in a large-scale field trial. Without close collaborations between molecular biologists (or geneticists) and breeders, unrealistic field trials have overestimated the agronomic effects of tested genes. The authors proposed five criteria for evaluating yield gain in field trials, including standardized definitions of yield, and multiple-location and multiyear experiments.

Drought resistance is also a complex trait that is defined differently under different scenarios, and is greatly affected by the environment. This complexity causes a similar disconnect between genetic studies and the breeding of drought resistance. Multiple breeding programmes have been undertaken worldwide by large research units such as the International Rice Research Institute (IRRI) and the International Maize and Wheat Improvement Center (CIMMYT) in pursuit of drought-resistant crops. At the same time, molecular biologists and geneticists continue to report the cloning of genes with drought resistance or tolerance traits, but these genes are rarely beneficial to crop breeders. As drought resistance expert Lijun Luo said at a recent conference in Sanya last month, “out of the over 300 rice functional genes claimed to increase drought resistance, none of them has been successfully applied in breeding!”

The main problem, according to Luo, is that these molecular studies focus on ‘drought tolerance traits’ rather than ‘yield under drought’. There is a well-established trade-off between stress tolerance and the productivity of plants; many wild relatives of crops exhibit strong stress tolerance but poor yield potentials. Conversely, upland rice varieties, such as IRAT109, that display stable yield under drought tend to have very poor drought tolerance (according to Luo). Improving the drought tolerance of crops without considering yield in the field is shooting at the wrong target.

If IRAT109 is not drought tolerant, then the question arises of what guarantees its yield stability under drought. The answer is its elite drought avoidance. It has long been realized that drought resistance can be achieved by multiple traits that are broadly classifiable into three main types: drought escape (by short life duration), drought avoidance (by deeper root distribution) and drought tolerance4. Scientists who use model plants such as Arabidopsis and rice to study drought resistance mechanism often focus on drought tolerance traits — such as the ability of plants to survive drought when dehydration has already occurred in the plant tissues — using water deprivation or polyethylene glycol treatment to screen for resistance. The resultant phenotypes often bestow a higher survival rate of the plants under drought or a higher recovery rate during rehydration, but not necessarily a higher yield. Without deciding beforehand the specific drought-resistant trait that is needed to improve the productivity of the specific crops in the target environment, laboratory-based studies can become aimless and futile.

Knowledge about environments is also important. According to the levels of yield loss (from 85% to 40%) under drought, Kumar et al. classified drought stresses as very severe, severe, moderate and mild5. Henry and Torres in the IRRI tested the performance of several rice varieties and found that the varieties that are adapted to mild and moderate drought with stable yield are different from the varieties adapted to more severe drought stress6. As mild drought stress affects a large proportion of drought-prone rice-growing areas in the world, a laboratory experiment that applies severe stress treatment can hardly be expected to identify genes that are useful in most drought-affected areas. In addition, droughts can be of different durations (short or long), different frequencies (continuous, intermittent or once per season) or occur at different growth periods of the crop. Crops use different drought-resistant traits or mechanisms to adapt to these types of droughts. Purely laboratory-based research can oversimplify drought stress treatments and so fail to understand the severity or types of droughts that are agriculturally relevant7.

In a paper published in 2021, Xiong et al.8 reported that climate change has increased the ranking changes of wheat varieties in breeding trials over the past four decades. In other words, the relative performance of crop varieties is becoming less easy for breeders to predict. However, breeding trials targeted to drought or heat stress environments have not been affected. Breeding trials would also benefit from precisely targeted agronomically relevant stress environments.

To better cope with future droughts, drought-related crop research needs precision. Molecular biologists must cooperate with — or at least consult — agronomists to better understand their needs. It is certainly informative to study a drought avoidance trait such root architectures or a drought tolerance trait such leaf rolling9, but it is also crucial to monitor yield under drought. Moreover, high-yielding and widely planted varieties make a more appropriate genetic background than poor-yielding model genotypes when testing for drought resistance in the real world.

The natural variations of crops held in their wild relatives or in adapted landraces (such as upland rice) provide a valuable genetic resource to help to balance yield and drought resistance. The increasing availability of their genomes provide opportunities for researchers to identify the genes or quantitative trait loci that are most likely to complement the current breeding pool for drought resistance. Better evaluation of these materials, followed by their utilization in precision drought research, will hasten the development of resilient crops.

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sarcozona
1 day ago
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Has COVID set us up for a major heart disease epidemic? It’s happened before

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Over the first half of the 20th century the world saw growing rates of heart disease mortality. From the 1920s to the 1960s more and more people were dying from heart attacks. It was described as an epidemic of heart disease. But in the mid-1960s heart disease mortality suddenly plateaued.

In the United States, for example, around 35% of overall deaths could be attributed to cardiac causes in 1966. From that point on heart attack mortality began to dramatically drop. By the mid-1990s overall deaths in the United States due to cardiac causes was almost half of what it was 30 years prior.

This rise and fall of heart disease mortality in the 20th century still remains a mystery to researchers. The numbers can’t be explained by improvements in medicine and medical care. In fact, as rates of obesity increased in the later part of the century and processed food became more unhealthy, heart disease mortality realistically should have continued to rise.

One researcher, writing about the mystery in 2012, suggested the decline of the 20th century heart disease epidemic cannot be effectively explained by dietary or physical factors. Instead, there must be an unknown environmental biological factor at play.

"The epidemic is now virtually at an end, but we are left with the question, has CHD [coronary heart disease] been due to an environmental biological factor, which is a micro-organism, a bacterium or a virus? If so, it has not been clearly identified, but it has never been fully investigated," writes D.S Grimes.

Fallout from the flu pandemic

Around 20 years ago a pair of epidemiologists presented a controversial new hypothesis to explain this weird phenomenon: the 1918 influenza pandemic triggered a wave of heart damage in millions of people and primed them for later-life heart disease.

The research suggested a decline in H1N1 influenza activity over the decades following the 1918 pandemic correlated with a later drop in cardiac mortality. The hypothesis was that a combination of the virus circulating less and potential changes to the way the disease affects cardiovascular health in a host led to the overall decline in heart attack deaths over the later decades of the 20th century.

Unsurprisingly, this hypothesis has been fiercely debated by researchers over the past couple of decades. A detailed dig into the epidemiological data in 2016, from a trio of US researchers, found the connection between the 1918 pandemic and trends in mortality to be, “not congruent with the available data on long-term changes in heart disease mortality.”

In other words - yes, there has been a dramatic rise and fall in heart disease mortality over the 20th century but, no, it is unlikely to be related to the 1918 flu pandemic.

More recently, epidemiological research has focused explicitly on the possible long-term effects of prenatal H1N1 exposure during the 1918 pandemic. Here, researchers looked specifically at what happened in the long-term to those either still in the womb or just born around the years of 1918-19.

A compelling 2009 study compared the 1919 birth cohort to those born just before or just after the period of the acute pandemic. Across a variety of benchmarks the researchers found significant long-term health complications were more prominent in the 1919 cohort. After the age of 60 the 1919 cohort were found to have 25% more incidences of heart disease, plus lower levels of educational attainment compared to other cohorts.

“The fact that this cohort of people had elevated risks of disease even more than six decades after the pandemic indicates that maternal exposure to the influenza virus appears to have had wide-ranging and long-lasting health effects on offspring,” said Eileen Crimmins, one of the co-authors on the study, in a 2020 interview.

These studies are, of course, subject to a whole host of limitations, not the least of which being they can only look at overall population trends and not actually quantify which children were directly exposed to influenza while in the womb and which were not. The conclusions are based on the idea that the virus was so prevalent during 1918/19 that it is likely most babies were exposed.

Interestingly, the data is not limited to US birth cohorts. Subsequent studies have looked at long-term outcomes from birth cohorts born during the flu pandemic in both Taiwan and Sweden. Similar patterns were noted from increased rates of long-term health problems to lower levels of educational attainment.

Human hearts meet SARS-CoV-2

SARS-CoV-2 is a very different virus to influenza. In many ways it is much more problematic. It can infect a far wider assortment of human organs and tissues than influenza and it is mutating in ways very different to H1N1.

The COVID pandemic has not waned and dissipated in the same way the 1918 pandemic did. Instead, the SARS-CoV-2 virus is frantically changing its form from month to month leading people to experience relatively frequent reinfections. This constant exposure to the virus may be amplifying its long-term impact, but of particular interest is the potential impact this could have on our hearts.

A recently published study from Japanese researchers laid out exactly how SARS-CoV-2 can infect and damage the heart. The researchers concluded with a stark warning: we may be facing a looming heart disease epidemic over the coming decades.

In order to infect someone the SARS-CoV-2 virus first needs to track down cells harboring a particular kind of enzyme. Called ACE2, this enzyme acts a bit like a doorway into the cell for a coronavirus. The virus’s spike protein binds to ACE2, allowing the pathogen a pathway into the cell’s inner machinery.

In news that will surprise nobody, ACE2 receptors are all over the epithelial cells that line our nose, mouth, lungs and airways. This is how COVID manifests in the illness that most people are now quite familiar with.

But ACE2 receptors are not isolated to those particular respiratory cells. ACE2 can be found all over the body in a wide variety of organs – and this receptor is found in relatively high volumes on cells inside our heart.

Early warning signs

Early on in the pandemic doctors started to see a significant uptick in patients presenting to emergency rooms with acute heart problems. In the first eight weeks of the pandemic hitting New York City in early 2020 paramedics had to deal with three times the rate of nontraumatic out-of-hospital cardiac arrests compared to the same time period in 2019. Similar data was coming out of other regions hit in the earliest phase of the pandemic. In Northern Italy, for example, out-of-hospital heart attacks spiked by 58% across those initial months in 2020.

An early warning report from a team of doctors in New York City published in April 2020 noted distinct signs of heart tissue injury in a number of deceased COVID patients. This virus was doing something to our hearts.

As more time passed, and longer-term studies accumulated, it became clear that SARS-CoV-2 infections notably affected a person’s heart health. Waves of infections correlated with waves of heart attack deaths. In the 12 months following a bout of COVID people were five times more likely to suffer from myocarditis and twice as likely to experience a heart attack. Even recovered COVID patients were showing longer-term signs of heart damage.

But why were people facing a persistent risk of heart disease in the months, and perhaps years, following a case of COVID? Could a short-term infection with SARS-CoV-2 be causing a kind of long term damage to heart tissue that elevates one’s risk of cardiac complications?

Possibly. But another hypothesis started to emerge. Maybe the virus was becoming a latent infection – sitting quietly in heart tissue and slowly degrading a person’s overall heart health?

The lingering virus

To investigate this idea, a team of researchers, including Hidetoshi Masumoto and Kozue Murata from the RIKEN Center for Biosystems Dynamics Research, created a three-dimensional cardiac model in the lab using human-induced pluripotent stem (iPS) cells. This led to what the researchers describe as a “vascular network-like structure that morphologically and functionally mimics the human heart.”

The cardiac tissue model was then infected with SARS-CoV-2 and the researchers found the infection effectively persisted for up to 28 days. Most interesting, however, were the experiments with only mild or moderate viral exposures. In these cases, the researchers saw cardiac function recover from any initial abnormalities within a month. But the virus remained present in the heart tissue despite causing any observable dysfunction.

“The relationship between the severity of acute illness and persistent viral infection in the heart tissue is indirectly suggested by experiments conducted in the paper using various viral titers,” explain Masumoto and Murata in an email to New Atlas. “In other words, if exposed to a very high viral load during the acute phase, it may lead to fatal acute cardiac infection rather than persistent infection. Conversely, infection with a milder viral load may result in the virus lingering in the heart without causing heart dysfunction, indicating the potential for persistent infection.”

Then, to mimic what happens in a human heart in cases of acute ischemic heart disease, the researchers exposed their cardiac model to hypoxic stress. This simulates a scenario where heart tissue struggles to meet increased oxygen demands.

The experiments found heart tissue with a persistent SARS-CoV-2 infection showed significantly increased dysfunction when exposed to stress compared to uninfected cardiac models. This was despite the infection being so mild that there was no identifiable day-to-day dysfunction.

“Our findings suggest that patients with persistent SARS-CoV-2 infection may be more susceptible to developing heart dysfunction compared to non-infected individuals in the face of these increasingly prevalent diseases,” Masumoto and Murata say. “Ischemic heart diseases fundamentally arise from an imbalance between oxygen demand and supply to the heart. Therefore, situations where oxygen demand in the heart increases rapidly, such as excessive exercise, might potentially create similar stress conditions on the heart.”

It’s important to note that there are many unanswered questions right now. It is only speculation to suggest this lab model of persistent SARS-CoV-2 infection in heart tissue is responsible for the noted real-world increases in cardiac events following COVID. It is also unclear how often infections lead to persistent infiltration of heart tissue. Does vaccination reduce one’s likelihood of a persistent infection? Do we all have some trace of SARS-CoV-2 in our heart tissue now, or is it just some of us? And perhaps most significantly, do frequent reinfections increase the chances of a persistent infection in heart tissue?

Masumoto and Murata call their findings a “warning for the possibility of a heart failure pandemic in the post COVID-19 era.” They are also cautious of not being unnecessarily alarmist. They suggest these potential heart health issues can be mitigated if we work now to recognize and understand what is possibly happening.

“We're not suggesting an undue fear of SARS-CoV-2 in our research,” Masumoto and Murata add. “Rather, we propose coexistence with SARS-CoV-2 in the post-COVID-19 era. We hope that our research results will advance the development of diagnostic and treatment methods for persistent cardiac infection, enabling coexistence between the novel coronavirus and humanity.”

So what now?

If the 1918 flu pandemic caused a noticeable spike in heart disease over the following 50 years then what could a virus with a greater propensity for heart infiltration like SARS-CoV-2 cause?

There are too many unknowns to truly understand what the long-term effects of the COVID pandemic will be. And realistically, we will only clearly know decades from now if a few bouts with SARS-CoV-2 in 2020 and 2021 can lead to increased chances of heart disease in later life.

But we do know some things for sure. We know that viral infections can play a role in the development of heart disease. We also know that SARS-CoV-2 can affect the heart in ways that are relatively unique to coronaviruses. And we certainly know that over the first few years of the pandemic there has been a distinct increase in fatal cardiac events.

There are also some things we don't know for sure but have suspicions about. It is possible the 1918 flu pandemic triggered a century of poor health outcomes in its survivors. It is also possible the SARS-CoV-2 virus can lead to latent infections in the heart.

Eileen Crimmins, an demography expert and professor at USC Leonard Davis School of Gerontology, is clear in stating the possible long-term concerns of this COVID pandemic.

“I think that COVID is setting us up for a hundred years of problems.”

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sarcozona
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The WHO's claim that COVID wasn't airborne cost millions of lives. Now, they're changing the definition of airborne.

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